EnhancerDB
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  3. rs548558875[chr1:200750479]
Enhancers that have rs548558875[chr1:200750479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200738186 200752375 enh872
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Stomach Placenta Colon (HCT116) Uterus Adrenal Blood (Karpas-422) Lung (PC-9) Kidney Neural Stem Cells (H9) Heart
Transcript factors that have rs548558875[chr1:200750479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200749463 200750535 ZNF274 GTRD no Cervix (HeLa-S3) 21363750
chr1 200749463 200750535 ZNF274 GTRD no Cervix (HeLa-S3) 107855486
chr1 200750049 200750645 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107855493
chr1 200750472 200750492 RREB1 JASPAR yes 34471526
Genes associated with rs548558875[chr1:200750479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More