EnhancerDB
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  3. rs548559068[chr17:25683315]
Enhancers that have rs548559068[chr17:25683315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548559068[chr17:25683315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25683074 25683410 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21747769
chr17 25683108 25683564 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747770
chr17 25683141 25683785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747771
chr17 25683145 25683441 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21747772
chr17 25683174 25683464 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747773
chr17 25683200 25683470 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747774
chr17 25683209 25683759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747775
chr17 25683265 25683665 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747776
chr17 25683281 25683737 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747777
chr17 25683283 25683687 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747778
chr17 25683292 25683708 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747779
chr17 25683310 25683320 ZNF740 JASPAR yes 53624034
chr17 25683312 25683322 MZF1 JASPAR yes 53624035
chr17 25683312 25683322 SP1 JASPAR yes 53624036
chr17 25683312 25683322 ZNF740 JASPAR yes 53624037
chr17 25683313 25683323 SP1 JASPAR yes 53624038
chr17 25683313 25683323 ZNF740 JASPAR yes 53624039
chr17 25683313 25683617 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747780
Genes associated with rs548559068[chr17:25683315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More