EnhancerDB
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  3. rs548616586[chr1:234899193]
Enhancers that have rs548616586[chr1:234899193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548616586[chr1:234899193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234897364 234901169 ZNF274 GTRD no Cervix (HeLa-S3) 21397677
chr1 234898174 234900462 ZNF274 GTRD no Bone Marrow (K562) 21397679
chr1 234898284 234900422 ZNF274 GTRD no Bone Marrow (K562) 21397680
chr1 234898568 234899905 ZNF274 GTRD no Bone Marrow (K562) 21397682
chr1 234898703 234899481 ZNF274 GTRD no Liver (HepG2) 21397683
chr1 234898727 234899846 ZNF274 GTRD no Bone Marrow (K562) 21397684
chr1 234898741 234899707 ZNF274 GTRD no Liver (HepG2) 21397685
chr1 234898757 234900914 ZNF274 GTRD no Bone Marrow (K562) 21397686
chr1 234898771 234899831 ZNF143 GTRD no Epithelial (MCF-7) 21397687
chr1 234898778 234900508 ZNF274 GTRD no Bone Marrow (K562) 21397688
chr1 234898784 234899857 ZNF274 GTRD no Liver (HepG2) 21397689
chr1 234898832 234899470 ZNF274 GTRD no Liver (HepG2) 21397690
chr1 234898836 234900089 ZNF143 GTRD no Epithelial (MCF-7) 21397691
chr1 234898843 234899830 ZNF274 GTRD no Liver (HepG2) 21397692
chr1 234898864 234899856 ZNF274 GTRD no Cervix (HeLa-S3) 21397693
chr1 234898870 234900042 ZNF274 GTRD no Cervix (HeLa-S3) 21397694
chr1 234898897 234900152 ZNF274 GTRD no Cervix (HeLa-S3) 21397695
chr1 234898917 234899743 ZNF143 GTRD no Epithelial (MCF-7) 21397696
chr1 234898936 234900003 ZNF274 GTRD no Cervix (HeLa-S3) 21397697
chr1 234898984 234899600 ZNF274 GTRD no Bone Marrow (K562) 21397698
chr1 234898995 234899872 ZNF274 GTRD no Cervix (HeLa-S3) 21397699
chr1 234898996 234899957 ZBTB33 GTRD no Brain (SK-N-SH) 21397700
chr1 234899006 234899265 ZNF143 GTRD no Epithelial (MCF-7) 21397701
chr1 234899017 234899429 ZNF274 GTRD no Liver (HepG2) 21397702
chr1 234899028 234899448 ZNF274 GTRD no Liver (HepG2) 21397703
chr1 234899030 234899530 ZNF143 GTRD no Epithelial (MCF-7) 21397704
chr1 234899035 234899439 ZNF274 GTRD no Liver (HepG2) 21397705
chr1 234899037 234899868 ZNF274 GTRD no Bone Marrow (K562) 21397706
chr1 234899038 234899868 ZNF143 GTRD no Epithelial (MCF-7) 21397707
chr1 234899039 234899844 ZNF274 GTRD no Liver (HepG2) 21397708
chr1 234899040 234899461 ZNF274 GTRD no Liver (HepG2) 21397709
chr1 234899159 234899847 ZNF274 GTRD no Cervix (HeLa-S3) 21397710
chr1 234899189 234899204 HNF4G JASPAR yes 36312934
chr1 234899189 234899204 NR2C2 JASPAR yes 36312935
chr1 234899190 234899204 NR2F1 JASPAR yes 36312936
chr1 234899190 234899205 HNF4A JASPAR yes 36312937
Genes associated with rs548616586[chr1:234899193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More