EnhancerDB
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  3. rs548639498[chr5:172227342]
Enhancers that have rs548639498[chr5:172227342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172226784 172227709 vista50176
VISTA
Transcript factors that have rs548639498[chr5:172227342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172226947 172227615 STAT3 UCSC Txn Factor no Conserved 108537512
chr5 172227177 172227528 FOS UCSC Txn Factor no Conserved 108537513
chr5 172227293 172227562 CEBPB UCSC Txn Factor no Conserved 108537514
chr5 172227329 172227350 MAFG JASPAR yes 67828844
chr5 172227329 172227350 MAFG JASPAR yes 70763566
chr5 172227333 172227344 NFE2L2 JASPAR yes 67828845
chr5 172227333 172227344 NFE2L2 JASPAR yes 70763567
chr5 172227334 172227352 MAFF JASPAR yes 67828846
chr5 172227334 172227352 MAFF JASPAR yes 70763568
Genes associated with rs548639498[chr5:172227342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More