EnhancerDB
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  3. rs548668073[chr6:112318962]
Enhancers that have rs548668073[chr6:112318962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs548668073[chr6:112318962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112318945 112318963 RARA JASPAR yes 104396064
chr6 112318951 112318971 PPARG JASPAR yes 104396066
chr6 112318954 112318965 E2F4 JASPAR yes 104396067
chr6 112318954 112318965 E2F6 JASPAR yes 104396068
chr6 112318954 112318975 ZNF263 JASPAR yes 104396069
chr6 112318955 112318966 E2F1 JASPAR yes 104396070
Genes associated with rs548668073[chr6:112318962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More