EnhancerDB
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  3. rs548674144[chr3:56862125]
Enhancers that have rs548674144[chr3:56862125]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56850305 56876655 enh20643
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Placenta Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs548674144[chr3:56862125]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56862116 56862125 SRY JASPAR yes 2600030
chr3 56862123 56862127 YY1 TRANSFAC yes 2600031
chr3 56862123 56862133 HOXD11 JASPAR yes 2600032
chr3 56862123 56862134 HOXC12 JASPAR yes 2600033
Genes associated with rs548674144[chr3:56862125], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More