EnhancerDB
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  3. rs548734401[chr1:25095491]
Enhancers that have rs548734401[chr1:25095491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548734401[chr1:25095491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25094820 25096310 ZNF274 GTRD no Blood (GM12878) 107802466
chr1 25095477 25095492 MEF2C JASPAR yes 27529384
chr1 25095478 25095493 MEF2A JASPAR yes 27529385
chr1 25095479 25095491 MEF2A JASPAR yes 27529386
chr1 25095479 25095491 MEF2B JASPAR yes 27529387
chr1 25095479 25095491 MEF2D JASPAR yes 27529388
chr1 25095490 25095506 ZNF143 JASPAR yes 27529390
chr1 25095490 25095506 ZNF143 JASPAR yes 118251732
chr1 25095490 25095508 ESR2 JASPAR yes 27529391
chr1 25095490 25095508 ESR2 JASPAR yes 118251733
chr1 25095491 25095501 SP1 JASPAR yes 27529392
chr1 25095491 25095511 ESR1 JASPAR yes 27529393
chr1 25095491 25095511 ESR1 JASPAR yes 118251734
Genes associated with rs548734401[chr1:25095491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More