EnhancerDB
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  3. rs548758866[chr2:232537641]
Enhancers that have rs548758866[chr2:232537641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548758866[chr2:232537641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435737
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435738
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435739
chr2 232537558 232538019 CTCF UCSC Txn Factor no Conserved 108435743
chr2 232537598 232538195 TFAP2A UCSC Txn Factor no Conserved 108435744
chr2 232537602 232537930 TFAP2C UCSC Txn Factor no Conserved 108435745
chr2 232537625 232537645 PPARG JASPAR yes 81734708
chr2 232537637 232537649 INSM1 JASPAR yes 81734710
chr2 232537637 232537651 GLIS2 JASPAR yes 81734711
Genes associated with rs548758866[chr2:232537641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More