EnhancerDB
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  3. rs548804846[chr3:58025941]
Enhancers that have rs548804846[chr3:58025941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548804846[chr3:58025941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58025940 58025950 GSC JASPAR yes 2668002
chr3 58025941 58025949 OTX1 JASPAR yes 2668003
chr3 58025941 58025950 PITX3 JASPAR yes 2668004
Genes associated with rs548804846[chr3:58025941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More