EnhancerDB
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  3. rs548808463[chr16:85623675]
Enhancers that have rs548808463[chr16:85623675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548808463[chr16:85623675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85623160 85623807 TCF7L2 GTRD no Colon (HCT116) 21730679
chr16 85623160 85623807 TCF7L2 GTRD no Colon (HCT116) 108216734
chr16 85623170 85623989 ZNF274 GTRD no Blood (GM12878) 108216735
chr16 85623170 85626962 TCF7L2 GTRD no Colon (HCT116) 21730680
chr16 85623170 85626962 TCF7L2 GTRD no Colon (HCT116) 108216736
chr16 85623190 85623939 ZNF143 GTRD no Epithelial (MCF-7) 21730681
chr16 85623190 85623939 ZNF143 GTRD no Epithelial (MCF-7) 108216737
chr16 85623195 85626254 ZNF143 GTRD no Epithelial (MCF-7) 21730682
chr16 85623195 85626254 ZNF143 GTRD no Epithelial (MCF-7) 108216738
chr16 85623209 85626541 ZNF143 GTRD no Epithelial (MCF-7) 21730683
chr16 85623209 85626541 ZNF143 GTRD no Epithelial (MCF-7) 108216739
chr16 85623225 85624636 ZNF143 GTRD no Epithelial (MCF-7) 21730684
chr16 85623225 85624636 ZNF143 GTRD no Epithelial (MCF-7) 108216740
chr16 85623233 85626087 TCF7L2 GTRD no Colon (HCT116) 21730685
chr16 85623233 85626087 TCF7L2 GTRD no Colon (HCT116) 108216741
chr16 85623236 85623841 TCF7L2 GTRD no Colon (HCT116) 21730686
chr16 85623236 85623841 TCF7L2 GTRD no Colon (HCT116) 108216742
chr16 85623294 85623942 TCF7L2 GTRD no Colon (HCT116) 21730687
chr16 85623294 85623942 TCF7L2 GTRD no Colon (HCT116) 108216743
chr16 85623487 85624083 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108216744
chr16 85623533 85623883 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730688
chr16 85623533 85623883 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216745
chr16 85623583 85624073 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730689
chr16 85623583 85624073 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216746
chr16 85623608 85624204 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108216747
chr16 85623652 85624282 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108216748
chr16 85623659 85624215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730690
chr16 85623659 85624215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216749
chr16 85623670 85623675 GATA1 TRANSFAC yes 12080928
Genes associated with rs548808463[chr16:85623675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More