EnhancerDB
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  3. rs548840489[chr1:10581139]
Enhancers that have rs548840489[chr1:10581139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548840489[chr1:10581139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10581120 10581141 IRF1 JASPAR yes 26720694
chr1 10581126 10581141 FOXP1 JASPAR yes 26720697
chr1 10581126 10581147 IRF1 JASPAR yes 26720698
chr1 10581130 10581140 NFATC3 JASPAR yes 26720699
chr1 10581132 10581153 IRF1 JASPAR yes 26720701
chr1 10581134 10581149 PRDM1 JASPAR yes 26720702
chr1 10581136 10581140 YY1 TRANSFAC yes 26720703
chr1 10581136 10581157 ZNF263 JASPAR yes 26720704
chr1 10581138 10581159 IRF1 JASPAR yes 26720705
chr1 10581139 10581160 ZNF263 JASPAR yes 26720706
Genes associated with rs548840489[chr1:10581139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More