EnhancerDB
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  3. rs548842439[chr1:172323479]
Enhancers that have rs548842439[chr1:172323479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548842439[chr1:172323479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172323478 172323481 MYB TRANSFAC yes 33125082
chr1 172323478 172323494 E2F2 JASPAR yes 33125083
Genes associated with rs548842439[chr1:172323479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More