EnhancerDB
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  3. rs548876988[chr5:79488250]
Enhancers that have rs548876988[chr5:79488250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548876988[chr5:79488250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79487803 79488509 POLR2A UCSC Txn Factor no Conserved 108535541
chr5 79488245 79488255 BHLHE22 JASPAR yes 63704455
chr5 79488245 79488255 NEUROD2 JASPAR yes 63704456
chr5 79488245 79488255 OLIG2 JASPAR yes 63704457
chr5 79488245 79488255 OLIG3 JASPAR yes 63704458
Genes associated with rs548876988[chr5:79488250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More