EnhancerDB
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  3. rs548896515[chr6:35006950]
Enhancers that have rs548896515[chr6:35006950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34986593 35008101 enh23172
Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548896515[chr6:35006950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35006944 35006959 RUNX2 JASPAR yes 101258396
chr6 35006945 35006955 RUNX3 JASPAR yes 101258397
chr6 35006950 35006956 SOX10 JASPAR yes 101258398
Genes associated with rs548896515[chr6:35006950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More