EnhancerDB
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  3. rs548938172[chr1:27867554]
Enhancers that have rs548938172[chr1:27867554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs548938172[chr1:27867554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27866892 27870463 ZNF274 GTRD no Bone Marrow (K562) 107802587
chr1 27867535 27867555 RREB1 JASPAR yes 27707097
chr1 27867537 27867557 RREB1 JASPAR yes 27707098
Genes associated with rs548938172[chr1:27867554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More