EnhancerDB
  1. Home
  2. SNP
  3. rs548946949[chr18:55932190]
Enhancers that have rs548946949[chr18:55932190]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55922865 55949275 enh17739
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs548946949[chr18:55932190]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55932182 55932199 RXRA JASPAR yes 110933835
chr18 55932188 55932209 IRF1 JASPAR yes 110933836
chr18 55932190 55932205 STAT2 JASPAR yes 110933837
Genes associated with rs548946949[chr18:55932190], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More