EnhancerDB
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  3. rs548954492[chr12:65056107]
Enhancers that have rs548954492[chr12:65056107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548954492[chr12:65056107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65056101 65056119 RARA JASPAR yes 121422712
chr12 65056102 65056110 TBX15 JASPAR yes 121422713
chr12 65056102 65056113 E2F6 JASPAR yes 121422714
chr12 65056103 65056108 SP1 TRANSFAC yes 121422715
Genes associated with rs548954492[chr12:65056107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More