EnhancerDB
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  3. rs549058845[chr12:65076346]
Enhancers that have rs549058845[chr12:65076346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549058845[chr12:65076346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65076096 65076577 ZNF274 GTRD no Liver (HepG2) 21552917
chr12 65076096 65076577 ZNF274 GTRD no Liver (HepG2) 108041936
chr12 65076321 65076765 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21552918
chr12 65076321 65076765 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108041937
chr12 65076343 65076358 FOXP1 JASPAR yes 121425960
chr12 65076344 65076359 FOXP1 JASPAR yes 121425961
chr12 65076345 65076360 FOXP1 JASPAR yes 121425962
chr12 65076345 65076366 IRF1 JASPAR yes 121425963
chr12 65076346 65076361 FOXP1 JASPAR yes 121425964
chr12 65076346 65076367 IRF1 JASPAR yes 121425965
Genes associated with rs549058845[chr12:65076346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More