EnhancerDB
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  3. rs549094193[chr17:80830859]
Enhancers that have rs549094193[chr17:80830859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs549094193[chr17:80830859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80830109 80830868 TCF7L2 GTRD no Colon (HCT116) 21800950
chr17 80830109 80830868 TCF7L2 GTRD no Colon (HCT116) 108313075
chr17 80830129 80830943 TCF7L2 GTRD no Colon (HCT116) 21800951
chr17 80830129 80830943 TCF7L2 GTRD no Colon (HCT116) 108313076
chr17 80830404 80830988 TCF7L2 GTRD no Colon (HCT116) 21800952
chr17 80830404 80830988 TCF7L2 GTRD no Colon (HCT116) 108313077
chr17 80830404 80830988 TCF7L2 GTRD no Colon (HCT116) 108313078
chr17 80830434 80830947 ZNF143 GTRD no Epithelial (MCF-7) 21800953
chr17 80830434 80830947 ZNF143 GTRD no Epithelial (MCF-7) 108313079
chr17 80830514 80831174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800955
chr17 80830514 80831174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313081
chr17 80830514 80831174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313082
chr17 80830755 80831059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800956
chr17 80830755 80831059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313083
chr17 80830802 80831172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800957
chr17 80830802 80831172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313084
chr17 80830853 80830872 CTCF JASPAR yes 56390318
Genes associated with rs549094193[chr17:80830859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More