EnhancerDB
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  3. rs549114773[chr17:80510018]
Enhancers that have rs549114773[chr17:80510018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549114773[chr17:80510018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80510003 80510018 RFX5 JASPAR yes 56373931
chr17 80510008 80510022 TLX1 JASPAR yes 56373932
chr17 80510008 80510023 TFAP2A JASPAR yes 56373933
chr17 80510013 80510028 TP53 JASPAR yes 56373934
chr17 80510014 80510029 TP53 JASPAR yes 56373935
Genes associated with rs549114773[chr17:80510018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More