EnhancerDB
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  3. rs549153512[chr1:225799011]
Enhancers that have rs549153512[chr1:225799011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs549153512[chr1:225799011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225799001 225799012 PROP1 JASPAR yes 35755456
chr1 225799003 225799015 FOXI1 JASPAR yes 35755457
chr1 225799003 225799017 POU4F1 JASPAR yes 35755458
chr1 225799003 225799018 FOXP1 JASPAR yes 35755459
chr1 225799003 225799018 HNF1A JASPAR yes 35755460
chr1 225799004 225799016 FOXC2 JASPAR yes 35755461
chr1 225799004 225799018 ONECUT2 JASPAR yes 35755462
chr1 225799004 225799018 ONECUT3 JASPAR yes 35755463
chr1 225799005 225799016 FOXB1 JASPAR yes 35755464
chr1 225799005 225799016 FOXC1 JASPAR yes 35755465
chr1 225799005 225799016 PROP1 JASPAR yes 35755466
chr1 225799005 225799021 POU4F2 JASPAR yes 35755467
chr1 225799005 225799021 POU4F3 JASPAR yes 35755468
chr1 225799007 225799019 FOXI1 JASPAR yes 35755470
chr1 225799007 225799021 POU4F1 JASPAR yes 35755471
chr1 225799007 225799022 FOXP1 JASPAR yes 35755472
chr1 225799007 225799022 HNF1A JASPAR yes 35755473
chr1 225799008 225799020 FOXC2 JASPAR yes 35755474
chr1 225799008 225799021 HNF1B JASPAR yes 35755475
chr1 225799008 225799022 ONECUT3 JASPAR yes 35755476
chr1 225799009 225799020 FOXB1 JASPAR yes 35755477
chr1 225799009 225799020 FOXC1 JASPAR yes 35755478
chr1 225799009 225799020 PROP1 JASPAR yes 35755479
chr1 225799010 225799014 YY1 TRANSFAC yes 35755480
Genes associated with rs549153512[chr1:225799011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More