EnhancerDB
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  3. rs549195693[chr17:36585273]
Enhancers that have rs549195693[chr17:36585273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 36581363 36609795 enh17126
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs549195693[chr17:36585273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 36584948 36585618 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21752446
chr17 36584948 36585618 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108252420
chr17 36585176 36585480 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108252421
chr17 36585190 36585837 TCF7L2 UCSC Txn Factor no Conserved 108252422
chr17 36585216 36585792 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108252423
chr17 36585219 36585663 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21752447
chr17 36585219 36585663 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108252424
chr17 36585241 36585837 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108252425
chr17 36585263 36585274 NFKB1 JASPAR yes 54112680
chr17 36585264 36585634 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21752448
chr17 36585264 36585634 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108252426
chr17 36585269 36585279 SP1 JASPAR yes 54112681
chr17 36585270 36585276 SP1 TRANSFAC yes 54112682
chr17 36585270 36585280 SP1 JASPAR yes 54112683
Genes associated with rs549195693[chr17:36585273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More