EnhancerDB
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  3. rs549239906[chr1:39604397]
Enhancers that have rs549239906[chr1:39604397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549239906[chr1:39604397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39604391 39604402 CEBPA JASPAR yes 28256825
chr1 39604391 39604403 HLF JASPAR yes 28256826
chr1 39604392 39604402 CEBPB JASPAR yes 28256827
chr1 39604392 39604402 CEBPD JASPAR yes 28256828
chr1 39604392 39604402 CEBPE JASPAR yes 28256829
chr1 39604392 39604402 CEBPG JASPAR yes 28256830
chr1 39604392 39604403 CEBPB JASPAR yes 28256831
Genes associated with rs549239906[chr1:39604397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More