EnhancerDB
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  3. rs549258670[chr16:88819665]
Enhancers that have rs549258670[chr16:88819665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549258670[chr16:88819665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88819660 88819670 SP1 JASPAR yes 12299832
chr16 88819661 88819669 SP1 TRANSFAC yes 12299833
chr16 88819661 88819671 SP1 JASPAR yes 12299834
Genes associated with rs549258670[chr16:88819665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More