EnhancerDB
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  3. rs549297621[chr12:65049444]
Enhancers that have rs549297621[chr12:65049444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549297621[chr12:65049444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65049434 65049444 MNX1 JASPAR yes 121421689
chr12 65049442 65049446 TEAD2 TRANSFAC yes 121421691
chr12 65049444 65049458 GATA2 JASPAR yes 121421692
Genes associated with rs549297621[chr12:65049444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More