EnhancerDB
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  3. rs549314506[chr19:2632441]
Enhancers that have rs549314506[chr19:2632441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549314506[chr19:2632441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2632426 2632441 FOXP1 JASPAR yes 112086329
chr19 2632426 2632447 IRF1 JASPAR yes 112086330
chr19 2632427 2632442 FOXP1 JASPAR yes 112086331
chr19 2632429 2632444 FOXP1 JASPAR yes 112086332
chr19 2632430 2632445 STAT2 JASPAR yes 112086333
chr19 2632431 2632446 FOXP1 JASPAR yes 112086334
chr19 2632431 2632452 IRF1 JASPAR yes 112086335
chr19 2632433 2632445 FOXC2 JASPAR yes 112086336
chr19 2632433 2632453 RREB1 JASPAR yes 112086337
chr19 2632434 2632445 FOXP2 JASPAR yes 112086338
Genes associated with rs549314506[chr19:2632441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More