EnhancerDB
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  3. rs549317508[chr17:2772626]
Enhancers that have rs549317508[chr17:2772626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549317508[chr17:2772626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2772617 2772632 HNF4G JASPAR yes 52779849
chr17 2772618 2772633 HNF4A JASPAR yes 52779850
chr17 2772622 2772628 SOX10 JASPAR yes 52779851
Genes associated with rs549317508[chr17:2772626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More