EnhancerDB
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  3. rs549365380[chr16:84788001]
Enhancers that have rs549365380[chr16:84788001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 84781465 84790983 enh52383
Bone Marrow (K562) Skin (Keratinocyte) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs549365380[chr16:84788001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 84787846 84788282 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21719151
chr16 84787846 84788282 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108212797
chr16 84787948 84788334 CTCF UCSC Txn Factor no Conserved 108212798
chr16 84787959 84788223 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21719152
chr16 84787959 84788223 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108212799
chr16 84787987 84788277 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108212800
chr16 84787993 84788003 HOXC10 JASPAR yes 11997069
chr16 84787993 84788003 HOXD11 JASPAR yes 11997070
chr16 84787993 84788004 HOXC11 JASPAR yes 11997071
chr16 84787993 84788004 HOXC12 JASPAR yes 11997072
chr16 84787993 84788004 HOXD12 JASPAR yes 11997073
chr16 84787997 84788009 PROX1 JASPAR yes 11997075
Genes associated with rs549365380[chr16:84788001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More