EnhancerDB
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  3. rs549396403[chr6:30776563]
Enhancers that have rs549396403[chr6:30776563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549396403[chr6:30776563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30776559 30776570 FLI1 JASPAR yes 101053118
chr6 30776561 30776569 EHF JASPAR yes 101053119
chr6 30776563 30776568 ETS2 TRANSFAC yes 101053120
Genes associated with rs549396403[chr6:30776563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More