EnhancerDB
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  3. rs549409969[chr17:42175526]
Enhancers that have rs549409969[chr17:42175526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549409969[chr17:42175526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42175507 42175528 ZNF263 JASPAR yes 54386778
chr17 42175520 42175538 ESR2 JASPAR yes 54386780
chr17 42175520 42175540 PPARG JASPAR yes 54386781
chr17 42175522 42175537 ESR2 JASPAR yes 54386782
chr17 42175522 42175542 ESR1 JASPAR yes 54386783
chr17 42175523 42175527 LFA1 TRANSFAC yes 54386784
Genes associated with rs549409969[chr17:42175526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More