EnhancerDB
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  3. rs549416488[chr2:238526157]
Enhancers that have rs549416488[chr2:238526157]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238519874 238529599 enh19399
Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
chr2 238522379 238526567 vista1020
VISTA
Transcript factors that have rs549416488[chr2:238526157]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238526157 238526171 TLX1 JASPAR yes 68303426
chr2 238526157 238526171 TLX1 JASPAR yes 82124951
Genes associated with rs549416488[chr2:238526157], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More