EnhancerDB
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  3. rs549420241[chr17:65417964]
Enhancers that have rs549420241[chr17:65417964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs549420241[chr17:65417964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65416126 65418547 AR GTRD no Prostate (PC-3) 21782165
chr17 65416126 65418547 AR GTRD no Prostate (PC-3) 108285778
chr17 65416680 65419467 ZNF143 GTRD no Epithelial (MCF-7) 21782166
chr17 65416680 65419467 ZNF143 GTRD no Epithelial (MCF-7) 108285779
chr17 65417237 65418680 TEF1 GTRD no Bone (Osteoblast) 108285780
chr17 65417439 65419394 ZNF143 GTRD no Epithelial (MCF-7) 21782167
chr17 65417439 65419394 ZNF143 GTRD no Epithelial (MCF-7) 108285781
chr17 65417521 65418049 ZNF143 GTRD no Epithelial (MCF-7) 21782168
chr17 65417521 65418049 ZNF143 GTRD no Epithelial (MCF-7) 108285782
chr17 65417847 65418443 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21782169
chr17 65417847 65418443 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108285783
chr17 65417847 65418443 TCF7L2 UCSC Txn Factor no Conserved 108285784
chr17 65417856 65418325 STAT3 UCSC Txn Factor no Conserved 108285785
chr17 65417870 65418530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782170
chr17 65417870 65418530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285786
chr17 65417873 65418200 ZNF274 GTRD no Liver (HepG2) 108285787
chr17 65417877 65418313 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21782171
chr17 65417877 65418313 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285788
chr17 65417884 65418204 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782172
chr17 65417884 65418204 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285789
chr17 65417891 65418395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782173
chr17 65417891 65418395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285790
chr17 65417896 65418436 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21782174
chr17 65417896 65418436 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285791
chr17 65417901 65418377 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782175
chr17 65417901 65418377 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285792
chr17 65417903 65418426 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21782176
chr17 65417903 65418426 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108285793
chr17 65417903 65418667 POLR2A UCSC Txn Factor no Conserved 108285794
chr17 65417908 65418428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782177
chr17 65417908 65418428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285795
chr17 65417912 65418508 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782178
chr17 65417912 65418508 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285796
chr17 65417920 65418296 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782179
chr17 65417920 65418296 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285797
chr17 65417924 65418150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782180
chr17 65417924 65418150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285798
chr17 65417930 65418386 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782181
chr17 65417930 65418386 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285799
chr17 65417948 65418298 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21782182
chr17 65417948 65418298 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285800
chr17 65417958 65418362 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782183
chr17 65417958 65418362 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285801
chr17 65417959 65418219 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782184
chr17 65417959 65418219 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285802
chr17 65417962 65418358 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782185
chr17 65417962 65418358 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285803
chr17 65417964 65418294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782186
chr17 65417964 65418294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285804
Genes associated with rs549420241[chr17:65417964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More