EnhancerDB
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  3. rs549464110[chr1:157980149]
Enhancers that have rs549464110[chr1:157980149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 157969514 158001213 enh12308
Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549464110[chr1:157980149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 157980129 157980149 RREB1 JASPAR yes 32456869
chr1 157980131 157980151 RREB1 JASPAR yes 32456870
chr1 157980133 157980153 RREB1 JASPAR yes 32456871
chr1 157980135 157980155 RREB1 JASPAR yes 32456872
chr1 157980137 157980157 RREB1 JASPAR yes 32456873
chr1 157980139 157980159 RREB1 JASPAR yes 32456874
chr1 157980140 157980160 RREB1 JASPAR yes 32456875
chr1 157980141 157980161 RREB1 JASPAR yes 32456876
chr1 157980144 157980164 RREB1 JASPAR yes 32456877
chr1 157980149 157980163 GLIS2 JASPAR yes 32456878
Genes associated with rs549464110[chr1:157980149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More