EnhancerDB
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  3. rs549483282[chr1:10566485]
Enhancers that have rs549483282[chr1:10566485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549483282[chr1:10566485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10566476 10566496 TP63 JASPAR yes 26718593
chr1 10566477 10566495 TP53 JASPAR yes 26718594
chr1 10566477 10566495 TP73 JASPAR yes 26718595
Genes associated with rs549483282[chr1:10566485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 9982173 10003465 - LZIC ENSG00000162441.7 10003465 563020 Esophagus 0.0464143 130