EnhancerDB
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  3. rs549505261[chr15:99412664]
Enhancers that have rs549505261[chr15:99412664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99392124 99430186 enh16459
Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549505261[chr15:99412664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99411773 99412774 ZNF143 GTRD no Epithelial (MCF-7) 21681760
chr15 99411773 99412774 ZNF143 GTRD no Epithelial (MCF-7) 108168078
chr15 99411912 99412703 ZNF143 GTRD no Epithelial (MCF-7) 21681761
chr15 99411912 99412703 ZNF143 GTRD no Epithelial (MCF-7) 108168079
chr15 99412653 99412674 IRF1 JASPAR yes 25842746
chr15 99412657 99412678 IRF1 JASPAR yes 25842747
chr15 99412658 99412679 IRF1 JASPAR yes 25842748
chr15 99412659 99412680 IRF1 JASPAR yes 25842749
chr15 99412660 99412675 FOXP1 JASPAR yes 25842750
chr15 99412660 99412681 IRF1 JASPAR yes 25842751
chr15 99412661 99412682 IRF1 JASPAR yes 25842752
chr15 99412662 99412677 FOXP1 JASPAR yes 25842753
chr15 99412663 99412678 FOXP1 JASPAR yes 25842754
chr15 99412664 99412679 FOXP1 JASPAR yes 25842755
Genes associated with rs549505261[chr15:99412664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More