EnhancerDB
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  3. rs549521900[chr1:32424297]
Enhancers that have rs549521900[chr1:32424297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 32415585 32431955 enh11723
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549521900[chr1:32424297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 32424277 32424297 RREB1 JASPAR yes 27968460
chr1 32424279 32424299 RREB1 JASPAR yes 27968461
chr1 32424287 32424299 ZBTB7B JASPAR yes 27968465
chr1 32424287 32424299 ZBTB7C JASPAR yes 27968466
chr1 32424292 32424313 IRF1 JASPAR yes 27968467
chr1 32424295 32424316 IRF1 JASPAR yes 27968468
chr1 32424296 32424317 IRF1 JASPAR yes 27968469
chr1 32424297 32424318 IRF1 JASPAR yes 27968470
Genes associated with rs549521900[chr1:32424297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More