EnhancerDB
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  3. rs549551954[chr13:113371522]
Enhancers that have rs549551954[chr13:113371522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549551954[chr13:113371522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113371508 113371523 FOXA1 JASPAR yes 60429411
chr13 113371509 113371525 SRF JASPAR yes 60429416
chr13 113371512 113371524 SRF JASPAR yes 60429419
chr13 113371517 113371532 JUND JASPAR yes 60429420
chr13 113371520 113371540 TBX19 JASPAR yes 60429421
chr13 113371522 113371538 T JASPAR yes 60429422
Genes associated with rs549551954[chr13:113371522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More