EnhancerDB
  1. Home
  2. SNP
  3. rs549560344[chr1:235123866]
Enhancers that have rs549560344[chr1:235123866]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549560344[chr1:235123866]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235123232 235123892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402660
chr1 235123646 235124169 ZNF274 GTRD no Liver (HepG2) 21402694
chr1 235123706 235124116 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402695
chr1 235123782 235124062 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402696
chr1 235123853 235123868 JUND JASPAR yes 36338897
chr1 235123854 235123867 JUN JASPAR yes 36338898
chr1 235123855 235123869 ATF7 JASPAR yes 36338899
chr1 235123856 235123868 JDP2 JASPAR yes 36338900
chr1 235123856 235123871 JUND JASPAR yes 36338901
chr1 235123857 235123870 JUN JASPAR yes 36338903
chr1 235123857 235123871 RORA JASPAR yes 36338904
chr1 235123858 235123866 CREB1 JASPAR yes 36338905
chr1 235123858 235123868 RORA JASPAR yes 36338906
chr1 235123864 235123868 YY1 TRANSFAC yes 36338907
Genes associated with rs549560344[chr1:235123866], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More