EnhancerDB
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Enhancers that have rs549574089[chr12:96047127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96013625 96050402 enh14919
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549574089[chr12:96047127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96045310 96049566 AR GTRD no Prostate (PC-3) 21567360
chr12 96045310 96049566 AR GTRD no Prostate (PC-3) 108052836
chr12 96046387 96048874 ZNF274 GTRD no Liver (HepG2) 21567364
chr12 96046387 96048874 ZNF274 GTRD no Liver (HepG2) 108052837
chr12 96046413 96047296 ZNF143 GTRD no Epithelial (MCF-7) 21567366
chr12 96046445 96049015 ZNF143 GTRD no Epithelial (MCF-7) 21567367
chr12 96046445 96049015 ZNF143 GTRD no Epithelial (MCF-7) 108052838
chr12 96046472 96048135 ZNF274 GTRD no Liver (HepG2) 21567368
chr12 96046472 96048135 ZNF274 GTRD no Liver (HepG2) 108052839
chr12 96046486 96047248 ZNF143 GTRD no Epithelial (MCF-7) 21567369
chr12 96046510 96047400 ZNF274 GTRD no Liver (HepG2) 21567370
chr12 96046582 96049002 ZNF143 GTRD no Epithelial (MCF-7) 21567371
chr12 96046582 96049002 ZNF143 GTRD no Epithelial (MCF-7) 108052840
chr12 96046670 96049091 ZBTB33 GTRD no Lung (A549) 108052841
chr12 96046743 96049076 ZBTB33 GTRD no Lung (A549) 108052842
chr12 96046847 96048371 ZNF274 GTRD no Blood (GM12878) 108052843
chr12 96046929 96048808 ZBTB33 GTRD no Lung (A549) 108052844
chr12 96046941 96048313 ZNF143 GTRD no Epithelial (MCF-7) 21567372
chr12 96046941 96048313 ZNF143 GTRD no Epithelial (MCF-7) 108052845
chr12 96046954 96048213 ZNF274 GTRD no Blood (GM12878) 108052846
chr12 96046996 96048324 ZNF274 GTRD no Blood (GM12878) 108052847
chr12 96046997 96049029 ZNF143 GTRD no Epithelial (MCF-7) 21567373
chr12 96046997 96049029 ZNF143 GTRD no Epithelial (MCF-7) 108052848
chr12 96047007 96049031 ZBTB33 GTRD no Lung (A549) 108052849
chr12 96047034 96047374 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567374
chr12 96047045 96047365 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567375
chr12 96047051 96048037 ZNF274 GTRD no Blood (GM12878) 108052850
chr12 96047064 96049167 ZNF143 GTRD no Epithelial (MCF-7) 21567376
chr12 96047064 96049167 ZNF143 GTRD no Epithelial (MCF-7) 108052851
chr12 96047068 96048375 ZNF274 GTRD no Cervix (HeLa-S3) 21567377
chr12 96047068 96048375 ZNF274 GTRD no Cervix (HeLa-S3) 108052852
chr12 96047080 96048315 ZNF274 GTRD no Blood (GM12878) 108052853
chr12 96047106 96049195 ZNF143 GTRD no Epithelial (MCF-7) 21567378
chr12 96047106 96049195 ZNF143 GTRD no Epithelial (MCF-7) 108052854
Genes associated with rs549574089[chr12:96047127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More