EnhancerDB
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  3. rs549589219[chr3:149311175]
Enhancers that have rs549589219[chr3:149311175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149284825 149341275 enh21022
Brain (SK-N-MC) Liver Colon (HCT116) Uterus Kidney Stomach Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549589219[chr3:149311175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149311154 149311175 IRF1 JASPAR yes 6510744
chr3 149311160 149311181 IRF1 JASPAR yes 6510745
chr3 149311162 149311177 STAT2 JASPAR yes 6510746
chr3 149311165 149311186 IRF1 JASPAR yes 6510747
chr3 149311167 149311182 PRDM1 JASPAR yes 6510748
chr3 149311167 149311182 STAT2 JASPAR yes 6510749
chr3 149311168 149311182 SPIC JASPAR yes 6510750
chr3 149311168 149311182 STAT1 JASPAR yes 6510751
chr3 149311169 149311190 IRF1 JASPAR yes 6510752
chr3 149311170 149311185 FOXP1 JASPAR yes 6510753
chr3 149311172 149311187 FOXP1 JASPAR yes 6510754
chr3 149311172 149311193 IRF1 JASPAR yes 6510755
chr3 149311174 149311189 FOXP1 JASPAR yes 6510756
chr3 149311175 149311190 FOXP1 JASPAR yes 6510757
Genes associated with rs549589219[chr3:149311175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More