EnhancerDB
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  3. rs549604554[chr16:14620036]
Enhancers that have rs549604554[chr16:14620036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14614623 14626995 enh3907
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549604554[chr16:14620036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14620030 14620051 IRF1 JASPAR yes 9706297
chr16 14620031 14620046 FOXP1 JASPAR yes 9706298
chr16 14620033 14620048 FOXP1 JASPAR yes 9706299
chr16 14620035 14620050 FOXP1 JASPAR yes 9706300
chr16 14620036 14620051 FOXP1 JASPAR yes 9706301
Genes associated with rs549604554[chr16:14620036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More