EnhancerDB
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  3. rs549642905[chr4:148683308]
Enhancers that have rs549642905[chr4:148683308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148667325 148718095 enh37177
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549642905[chr4:148683308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148683299 148683319 TP63 JASPAR yes 93518357
chr4 148683300 148683318 TP53 JASPAR yes 93518358
chr4 148683300 148683318 TP73 JASPAR yes 93518359
chr4 148683304 148683325 REST JASPAR yes 93518360
Genes associated with rs549642905[chr4:148683308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More