EnhancerDB
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  3. rs549654688[chr11:62272220]
Enhancers that have rs549654688[chr11:62272220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62262575 62280595 enh13974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549654688[chr11:62272220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62272213 62272223 RORA JASPAR yes 39209956
chr11 62272214 62272227 NR2F1 JASPAR yes 39209957
chr11 62272217 62272237 ESR1 JASPAR yes 39209958
chr11 62272218 62272222 ESR1 TRANSFAC yes 39209959
Genes associated with rs549654688[chr11:62272220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More