EnhancerDB
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  3. rs549679061[chr17:25676213]
Enhancers that have rs549679061[chr17:25676213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr17 25676124 25676302 vista24254
VISTA
Transcript factors that have rs549679061[chr17:25676213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25675724 25676380 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21747651
chr17 25675724 25676380 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108245221
chr17 25675928 25676308 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747652
chr17 25675928 25676308 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245222
chr17 25675964 25676428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747653
chr17 25675964 25676428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245223
chr17 25675998 25676374 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21747654
chr17 25675998 25676374 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108245224
chr17 25676006 25676386 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245225
chr17 25676037 25676473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245226
chr17 25676054 25676424 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747655
chr17 25676054 25676424 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245227
chr17 25676056 25676336 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108245228
chr17 25676072 25676442 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245229
chr17 25676079 25676364 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747656
chr17 25676079 25676364 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245230
chr17 25676082 25676466 CTCF UCSC Txn Factor no Conserved 108245231
chr17 25676093 25676397 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245232
chr17 25676093 25676457 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245233
chr17 25676097 25676457 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245234
chr17 25676107 25676377 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245235
chr17 25676122 25676386 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245236
chr17 25676123 25676413 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245237
chr17 25676123 25676413 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245238
chr17 25676132 25676396 RAD21 UCSC Txn Factor no Conserved 108245239
chr17 25676133 25676363 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108245240
chr17 25676133 25676596 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245241
chr17 25676136 25676380 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245242
chr17 25676137 25676397 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747657
chr17 25676137 25676397 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245243
chr17 25676143 25676413 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245244
chr17 25676155 25676385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747658
chr17 25676155 25676385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245245
chr17 25676173 25676376 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108245246
chr17 25676177 25676426 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245247
chr17 25676181 25676358 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21747659
chr17 25676181 25676358 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108245248
chr17 25676185 25676351 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245249
chr17 25676186 25676245 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245250
chr17 25676194 25676332 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21747660
chr17 25676194 25676332 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108245251
chr17 25676206 25676351 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747661
chr17 25676206 25676351 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245252
Genes associated with rs549679061[chr17:25676213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More