EnhancerDB
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  3. rs549692241[chr17:55996206]
Enhancers that have rs549692241[chr17:55996206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549692241[chr17:55996206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55996199 55996210 FOXB1 JASPAR yes 54999230
chr17 55996201 55996216 HNF1A JASPAR yes 54999231
chr17 55996202 55996223 IRF1 JASPAR yes 54999232
chr17 55996206 55996218 IRF1 JASPAR yes 54999233
Genes associated with rs549692241[chr17:55996206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More