EnhancerDB
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  3. rs549716136[chr3:58022785]
Enhancers that have rs549716136[chr3:58022785]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549716136[chr3:58022785]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58022777 58022798 IRF1 JASPAR yes 2667459
chr3 58022779 58022800 IRF1 JASPAR yes 2667460
chr3 58022781 58022802 IRF1 JASPAR yes 2667461
chr3 58022782 58022797 FOXP1 JASPAR yes 2667462
chr3 58022782 58022803 IRF1 JASPAR yes 2667463
chr3 58022783 58022804 IRF1 JASPAR yes 2667464
chr3 58022784 58022799 FOXP1 JASPAR yes 2667465
chr3 58022784 58022805 IRF1 JASPAR yes 2667466
chr3 58022785 58022800 FOXP1 JASPAR yes 2667467
chr3 58022785 58022806 IRF1 JASPAR yes 2667468
Genes associated with rs549716136[chr3:58022785], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More