EnhancerDB
  1. Home
  2. SNP
  3. rs549721092[chr17:42178998]
Enhancers that have rs549721092[chr17:42178998]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549721092[chr17:42178998]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42178988 42178998 RORA JASPAR yes 54387301
chr17 42178989 42179002 NR2F1 JASPAR yes 54387302
chr17 42178998 42179013 STAT2 JASPAR yes 54387304
Genes associated with rs549721092[chr17:42178998], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More