EnhancerDB
  1. Home
  2. SNP
  3. rs549871057[chr1:12611561]
Enhancers that have rs549871057[chr1:12611561]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs549871057[chr1:12611561]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12606847 12611860 ZBTB33 GTRD no Lung (A549) 107802126
chr1 12611558 12611573 FOXP1 JASPAR yes 26832917
chr1 12611559 12611574 FOXP1 JASPAR yes 26832918
chr1 12611560 12611575 FOXP1 JASPAR yes 26832919
chr1 12611560 12611581 IRF1 JASPAR yes 26832920
chr1 12611561 12611576 FOXP1 JASPAR yes 26832921
chr1 12611561 12611582 IRF1 JASPAR yes 26832922
Genes associated with rs549871057[chr1:12611561], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More