EnhancerDB
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  3. rs549891249[chr1:173373039]
Enhancers that have rs549891249[chr1:173373039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs549891249[chr1:173373039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173373037 173373052 FOXP1 JASPAR yes 33195516
chr1 173373038 173373053 FOXP1 JASPAR yes 33195517
chr1 173373039 173373054 FOXP1 JASPAR yes 33195518
chr1 173373039 173373060 IRF1 JASPAR yes 33195519
Genes associated with rs549891249[chr1:173373039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More