EnhancerDB
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  3. rs549949322[chr2:232522901]
Enhancers that have rs549949322[chr2:232522901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549949322[chr2:232522901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232522893 232522903 SP1 JASPAR yes 81732645
chr2 232522899 232522910 FOSL2 JASPAR yes 81732646
chr2 232522901 232522914 SMAD2 JASPAR yes 81732647
Genes associated with rs549949322[chr2:232522901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More